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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_55964.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bHLH | ||||||||
Protein Properties | Length: 137aa MW: 15368.7 Da PI: 10.0432 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.2 | 2.3e-06 | 65 | 104 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +i + ++L++llP+a ++ ++ + +L++++ YI+sL MLOC_55964.9 65 QISDLVSKLQDLLPEARLRGNDRVPSSRVLQETCTYIRSL 104 789999*********8899*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 2.9E-7 | 49 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.502 | 50 | 104 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.98E-8 | 64 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MRMTEVGEPK CFILASKSSL PPALHLLLFK ASSHLQRRCT SSMRLTQAPR SRSRQSGSSR 60 ITDEQISDLV SKLQDLLPEA RLRGNDRVPS SRVLQETCTY IRSLHREVDD LSERLSELLA 120 TSDMSSAQAA IIRSLLM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK069569 | 2e-94 | AK069569.1 Oryza sativa Japonica Group cDNA clone:J023022K12, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014752667.1 | 8e-48 | PREDICTED: uncharacterized protein LOC100821441 isoform X2 | ||||
Refseq | XP_014752666.1 | 8e-48 | PREDICTED: uncharacterized protein LOC100821441 isoform X2 | ||||
Refseq | XP_014752664.1 | 8e-48 | PREDICTED: uncharacterized protein LOC100821441 isoform X2 | ||||
Refseq | XP_014752660.1 | 8e-48 | PREDICTED: uncharacterized protein LOC100821441 isoform X2 | ||||
Swissprot | B8APB5 | 3e-46 | ILI6_ORYSI; Transcription factor ILI6 | ||||
Swissprot | Q0DUR2 | 3e-46 | ILI6_ORYSJ; Transcription factor ILI6 | ||||
TrEMBL | M0X036 | 6e-93 | M0X036_HORVD; Uncharacterized protein | ||||
STRING | BRADI1G73160.1 | 2e-44 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 2e-33 | bHLH family protein |